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🧠 hdsemg-pipe

HDsEMG Workflow Manager

A modular GUI application to guide users through high-density surface EMG (HDsEMG) processing, from raw signal acquisition to motor unit decomposition.

Welcome to the documentation for hdsemg-pipe, a sophisticated graphical user interface (GUI) application designed to streamline and partially automate the processing of high-density surface EMG (HDsEMG) data. This tool guides users through the entire workflow, from raw signal acquisition to motor unit decomposition.

Key Features

• 📂 Load and manage multiple .mat, .otb+ or .otb4 HDsEMG files
• 🔗 Associate files to form virtual grids
• 🧼 Interface with the hdsemg-select App for channel cleaning
• 🧬 Record decomposed motor unit data with linked metadata
• 💾 Save all results in a structured working directory

Quick Navigation

• Installation Guide: Step-by-step instructions for setting up hdsemg-pipe
• Usage Guide: Learn how to get started with the application. The documentation will guide you through the first steps of using the hdsemg-pipe application to inspect and clean your high-density surface EMG (HD-sEMG) data.
• Developer Guide: Information for contributors and developers

Requirements

• Python 3.8+
• See requirements.txt for detailed dependencies
• Compatible with Linux and Windows 11

Related Tools

• hdsemg-select App 🧼
• hdsemg-shared 📦
• openhdemg 🧬

Contributing

Contributions are welcome! If you'd like to improve hdsemg-pipe, please take a look at our Contributing Guide for details on how to get started.

Visit our GitHub repository to get started.